Hi Terry, I've attached some example Python code to find the (x,y,z) coordinates of volume grid points. The output after opening this file in Chimera (shown in the Reply Log (menu Favorites / Reply Log) looks like read map 1a0m.omap data size 91 95 82 xyz for index 15 7 13 is 2.96 -7.4 -1.46875 data value at ijk 15 7 13 is -0.381388 I put this example on the Chimera Python scripts page as readvol.py. http://plato.cgl.ucsf.edu/trac/chimera/wiki/Scripts Tom
Hey Everyone,
I'm am trying to do some unorthodox analysis of volume data using a script. As part of the analysis, I need to access the x,y,z coordinates of each of the points of a ccp4 map. How would I go about that in Chimera scripting once the data is read in?
Thanks, Terry