If not clear, the template here is the fasta file. I wonder where Sali's modeller allows filling residues in a multimer by also taking into account the inetraction between the different subunits. Not seen any example.
francesco pietra
---------- Forwarded message ----------
From:
Francesco Pietra <chiendarret@gmail.com>
Date: Sun, Jun 23, 2013 at 7:17 AM
Subject: modeling multimers
To: chimera <
chimera-users@cgl.ucsf.edu>
Hello:
Modeling a trimer (all three chains present, though missing residues and atoms) with chimera and modeller installed locally.
The default is modeling each chain, one at a time. The chains are identical in sequence but the X-ray structure shows different localized conformations. Question: is modeller modeling by taking the other two chains into account?
If already answered, beg pardon.
thanks
francesco pietra