Hi sir,

I downloaded chimera 1.13.1 at a website for free. Also, I am able to use the software without any licence needed. I carried out some research work using the software. Presently I am about to submit a paper for publication using your references. In this case, Will it be proper for me to submit a paper for publication using your references.

Best wishes

Billy.

Sent from Yahoo Mail on Android

On Mon, 7 Oct 2019 at 9:21 PM, Tom Goddard
<goddard@sonic.net> wrote:
Hi Shengyou,

The curvature.py script was attached to the Chimera mailing list message you found.

http://www.cgl.ucsf.edu/pipermail/chimera-users/2014-January/009580.html

It got renamed with a ".bin" suffix, so after you download you should change the file name to curvature.py. A similar capability is in ChimeraX, the "measure convexity" command

https://www.rbvi.ucsf.edu/chimerax/docs/user/commands/measure.html#convexity

Here's an example image using "measure convexity #1" on EMDB 0074.

Tom
On Oct 6, 2019, at 7:15 AM, huangsy@hust.edu.cn wrote:
Hi Tom,

I just noticed that you had helped a user about "Coloring EM map by curvature" in UCSF Chimera through some scripts like the following
open 1grl
	molmap #0 15 grid 2 model #1
	select #1
	open ~/Desktop/curvature.py
Could you please send me the "curvature.py" file or tell me where to download it?

Thank you very much for your help!
Best regards,

Shengyou
--
Shengyou Huang, PhD

Professor of Biophysics
School of Physics
Huazhong University of Science and Technology
Email: huangsy@hust.edu.cn
Lab web: http://huanglab.phys.hust.edu.cn/
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