On Mar 10, 2013, at 2:48 PM, Tomek Wlodarski wrote:
Hi!
I am trying to run Modeller from Chimera (Model/Refine Loops). I have downloaded the newest version of both, and I can run Modeller as a stand alone software via python. As a location of Modeller exe I put: /usr/lib/modeller9.11/bin/mod9.11 however when I try to run this it does nothing... Status is "completed" while State is "running" and Run time is (-). On the other hand I can run via Modeller server..
When I tried to run /usr/lib/modeller9.11/bin/mod9.11 I got: FATAL ERROR: MODINSTALL9v11 environment variable not set: incomplete MODELLER installation
This last part: do you mean you tried to run Modeller from outside Chimera and got that error? If so, then you should really ask on the Modeller mailing list: http://salilab.org/modeller/discussion_forum.html --Eric Eric Pettersen UCSF Computer Graphics Lab http://www.cgl.ucsf.edu