Hi Hira, As it says on the MD Movie interface, PSF/DCD came from MDTools. On that interface, "MDTools" is a button which if you had clicked it would have taken you here: http://www.ks.uiuc.edu/~jim/mdtools/ where you could download MDTools. Now, some changes and updates were made to make MDTools work in the context of Chimera and with newer types of DCD files. Chimera's version of MDTools is in <your Chimera installation>/share/Trajectory/DCD/MDToolsMarch97. In particular, the md_DCD.py file in that directory has several changes. --Eric Eric Pettersen UCSF Computer Graphics Lab http://www.cgl.ucsf.edu (on a Mac, "<your Chimera installation>" will be Chimera.app/Contents/Resources) On Jul 10, 2013, at 5:48 AM, Syeda Hira Batool <s.hirabatool@ymail.com> wrote:
Hello! I have psf and dcd files.I want to read them using my own script(non-commercial/educational purpose).So I want to know how Chimera reads dcd files.Can you please help me out in this regard by providing me some helping material or a script. Thank you
Hira Batool Student of BS-Bioinformatics Biosciences Department COMSATS Institute of Information Technology Islamabad, PAKISTAN
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