[Chimera-users] finding salt bridges

Hi everybody, I just realized my previous suggestion would not include the positively charged histidines, and I have not been able to think of a selector for just those nitrogens.

Example commands to first select by atom type and then find the H- bonds:

sel O2- | O3- | N3+ | Ng+ findhbond selRestrict both saveFile ~/mydir/myfile

Sorry about that, Elaine ----- Elaine C. Meng, Ph.D. meng@cgl.ucsf.edu UCSF Computer Graphics Lab and Babbitt Lab Department of Pharmaceutical Chemistry University of California, San Francisco http://www.cgl.ucsf.edu/home/meng/index.html