Dear Sir/Madam

Greetings for the day!!

Myself Rajlakshmi Chetty, is Doctoral student in field of Nanomaterials. I am self learning and using chimera since back few days with the help of website tutorials and am stuck with a problem which is described below:

I have .pdb file format of docked complex (Hex software) in which their is H bond is missing between ligand and receptor when opened in chimera. I tried Tools>structure depiction>find H bond but in that parameters query when i apply I am getting H bond of the whole complex which I don't want. I want to visualize H bond or any bonding between ligand and receptor. Is their any other way or what parameters change i need to do? 

I have attached H bond parameters dialog box with this mail.

This problem where I am stuck is need for the time for my research work. So your kind help will be a great blessings for me. Your help of gratitude will be highly appreciated.

Thanking you and looking forward for your reply!!


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Kind Regards
Rajlakshmi Chetty
Doctoral Student
School of Chemical Sciences
Central University of Gujarat 
Gandhinagar 382030 India

Mobile No :-  +91 9427178591
                    +91 8780155455 
e_mail      :-  rajlakshmi@cug.ac.in 
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