On May 12, 2017, at 10:23 AM, Dougherty, Matthew T wrote:Considering the files are 64GB in size, what would be more efficient, chimera script or python?10% difference, 10x, 100x, etcMatthew Dougherty
National Center for Macromolecular Imaging
Baylor College of Medicine
==================================================================================================From: Tom Goddard
Sent: Friday, May 12, 2017 12:07:47 PM
To: Dougherty, Matthew T
Cc: chimera-users@cgl.ucsf.edu
Subject: Re: [Chimera-users] scripting & density***CAUTION:*** This email is not from a BCM Source. Only click links or open attachments you know are safe._______________________________________________
Hi Matt,You would use vop threshold to make a map that has only the values 50-74 and then subtract it from the original map, and repeat with the range 90-110.vop thresh #0 min 50 set 0 max 74 setmax 0vop subtract #0 #1TomOn May 12, 2017, at 8:42 AM, Dougherty, Matthew T wrote:_______________________________________________Hi,I have a dataset, its values are 1-255. I would like to modify the density values using a script.Specifically, I would like to set density values 50-74 & 90-110 to the value of zero.Is there a way to do that using scripting, or do I need to do that using python?Matthew Dougherty
National Center for Macromolecular Imaging
Baylor College of Medicine
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