Hi Elaine,
    I have tried the tools that you have mentioned in detail but I am getting the .crd and .parm7 file in my MD simulation. So, when I am trying to open these, there is no file formats of these in Chimera. Can you suggest any solution for it? How can Chimera can read these files.
    Kindly help me as I have no idea.

Thank you.
Aditya.