Hello again,

Following another old thread,

http://plato.cgl.ucsf.edu/pipermail/chimera-users/2016-September/012743.html

I could morph/play the coordinates and Volume at the same time. The script is given below.

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# Open maps and set threshold

open 1.mrc

open 2.mrc

open start_full.pdb

open end_full.pdb

vol #0,1 level .025

# Create a marker for coloring

measure center #2 mark true radius 20 color red

~display #4

# Create morph volume

vop morph #0,1 frames 0 model #5

# Create morph models model #6

morph start #2 frames 200

morph interpolate #3 frames 200

morph movie

# marker on morph

measure center #6 mark true radius 20 color red

# Color near marker

scolor #5 zone #6 range 50

coordset #6 1,100; vop morph #0,1 start 0 playstep 0.01 frames 100 model #6

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Still the color is at centre of of the first Frame of morph. If I understand correct I have to measure the centre for each Frame and add marker and color it. But I still can't make it. Any help/directions in this regard would be very helpful.

Thanks in advance for your time and help.

best regards

Rajan