I want to calculate the centroid of the sugar ring and the distance from the centroid to another atom of amino-acid. I know this can be done using the Structure analysis tools in Chimera. I want to use distance command in the MD ensemble analysis and output it to the analysis to the text file.
How can I write output per frame to a text file in Chimera?
Your insight is appreciated.
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Regards, Dr. Neha S. Gandhi, Vice Chancellor's Research Fellow, Queensland University of Technology,