Hatuey, If I remember correctly, you need to open the density map twice, then contour at the same level for both maps: one at the positive value and the other negative. Each map is colored independently, so they can be depicted however you want. Jonathan On Mon, Jun 9, 2008 at 1:00 PM, <chimera-users-request@cgl.ucsf.edu> wrote:
Send Chimera-users mailing list submissions to chimera-users@cgl.ucsf.edu
To subscribe or unsubscribe via the World Wide Web, visit http://www.cgl.ucsf.edu/mailman/listinfo/chimera-users or, via email, send a message with subject or body 'help' to chimera-users-request@cgl.ucsf.edu
You can reach the person managing the list at chimera-users-owner@cgl.ucsf.edu
When replying, please edit your Subject line so it is more specific than "Re: Contents of Chimera-users digest..."
Today's Topics:
1. << Plotting Gaussian MO >> (Hatuey Hack)
----------------------------------------------------------------------
Message: 1 Date: Mon, 9 Jun 2008 10:24:29 -0300 From: "Hatuey Hack" <hatuey.hack@gmail.com> Subject: [Chimera-users] << Plotting Gaussian MO >> To: chimera-users@cgl.ucsf.edu Message-ID: <612c95fa0806090624l5395ab11k6c9b235379e1a4fe@mail.gmail.com> Content-Type: text/plain; charset=ISO-8859-1
Hi all,
I have a cube file with the Molecular Orbitals calculated with Gaussian.
When I load the cub file into Chimera, I am only seen half of the orbital surface.
I would like to know what should I do to get the whole molecular orbital surface colored (as usually) with only to colors (each on for one half).
Regards,
Hatuey
------------------------------
_______________________________________________ Chimera-users mailing list Chimera-users@cgl.ucsf.edu http://www.cgl.ucsf.edu/mailman/listinfo/chimera-users
End of Chimera-users Digest, Vol 62, Issue 11 *********************************************