Hello 
Thanks a lot for your effort
please help me to know how can I determine My Model for a certain mutated gene
(like smn protein for normal sequences,type I,II,III,and IV Spinal muscular atrophy)
How can I know the protein model for different seq is functional or non functional?
I made models for different affected cases of SMA with A suitable template for pdb  and Recorded The Qmean and GMQE number for each model with but till now I can not be able to determine this sequence produce good functional protein or not
especially with gene have Frame shift mutation which produce new protein and also have a lot of stop codon in the sequence
I hope you understand the meaning of  my Question ? and hope to guide me to suitable tool or method
Thanks