Chimera does its PDB parsing in the C++ layer (the PDBio class in the Python layer). There is a file named PDB.py in the mmCIF-parsing module, but it's not for parsing PDB files. Perhaps if you described why you need Python PDB parsing I could suggest options -- using PDBio possibly being one of them.

Eric Pettersen

UCSF Computer Graphics Lab

http://www.cgl.ucsf.edu

On Jan 29, 2007, at 1:49 PM, Jean Didier Pie Marechal wrote:

Hello everyone,
a short question. What is the right call for importing the pdbparser module in the chimera python shell? I found the PDB.py module in the site-package mmlib, but I don't know how to import it...
Thanks a lot,
JD

Dr. Jean-Didier Maréchal
Professor Lector
Unitat de Química Física
Departament de Química
Universitat Autònoma de Barcelona
Edifici C.n.
08193 Cerdonyola (Barcelona)
Tel: +34.935814988
e-mail: JeanDidier.Marechal@uab.es

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