Hi George, A picture alone isn't that useful. Would need the actual file to be sure, but you might try using command "~bond" to remove all bonds, and then showing as "ball" (actually ball & stick but without bonds there will just be balls). Or if those are not the right size either: when showing either balls or spheres, you can adjust size to any value using the "vdwdefine" command. <http://www.cgl.ucsf.edu/chimera/docs/UsersGuide/midas/vdwdefine.html> Best, Elaine ----- Elaine C. Meng, Ph.D. UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab Department of Pharmaceutical Chemistry University of California, San Francisco On Feb 9, 2012, at 6:05 AM, George Tzotzos wrote:
Hi, I'm attaching a jpg image of ligand affinity map fill points generated by AutoLigand. My question is whether there's a way to depict these fill points as "disconnected" spheres. Actions/spheres generates something like I'd like to see but the size of the spheres is too large. Regards George