Hi Forbes, The Chimera Intersurf tool uses Delaunay tessellation and the Python code is the ComputeTetrahedralization() function in file chimera/share/Intersurf/SurfMaker.py It uses the third-party Qhull package included with Chimera. The AIRS package of Chimera extensions that come with EMAN (single particle EM reconstruction code) includes a tool called ModeViewer that computes normal modes using MMTK. I do not see any documentation for it. I did try it long ago and it worked. http://ncmi.bcm.tmc.edu/software/AIRS Tom
Hi:
Do you folks know if there is a Python Script to do Delaunay Tessellation for proteins?
I am also wondering if anyone has written code to handle Elastic Normal Mode analysis.
Any suggestions or pointers would be appreciated.
Many thanks,
Forbes Burkowski