De : Eric Pettersen <pett@cgl.ucsf.edu>
Envoyé : mardi 10 janvier 2023 19:00
À : Audrey Piraud <audrey.piraud@etu.univ-cotedazur.fr>
Cc : chimera-users@cgl.ucsf.edu <chimera-users@cgl.ucsf.edu>
Objet : Re: [Chimera-users] Getting position of residues

Hi Audrey,

Each of those Residue objects has an 'id' attribute which in turn has 'chainId', 'position', and 'insertionCode' attributes. 'position' is the residue number from the input file and 'insertionCode' is the PDB insertion code (if any).

--Eric

Eric Pettersen

UCSF Computer Graphics Lab

On Jan 9, 2023, at 1:35 PM, Audrey Piraud via Chimera-users <chimera-users@cgl.ucsf.edu> wrote:

Hello,

I'm really sorry to bother you. I'm a student working with Chimera. I'm trying to get the position of the residues in the protein after selecting them with: runCommand("select"+AA_mute+"za<5") ;sel_Res = currentResidues().

I obtain a list of <_molecule.Residue object at 0x1133aa9b8> and I would like to obtain their position in the a.a sequences.

I'm waiting for your response,

Thanks a a lot,

Audrey Piraud
_______________________________________________
Chimera-users mailing list: Chimera-users@cgl.ucsf.edu
Manage subscription: https://www.rbvi.ucsf.edu/mailman/listinfo/chimera-users