Paul sent me this in a separate mail, which seems relevant...

I've just been able to raytrace with alpha channel by disabling the
 fog in the povray file. I don't know if it has always been
 necessary... if so, sorry for the trouble
 Paul

--Eric

                        Eric Pettersen

                        UCSF Computer Graphics Lab

                        http://www.cgl.ucsf.edu



On Dec 17, 2007, at 10:17 AM, Paul Pillot wrote:

You can also render your images using PovRay with transparent  
backgroung as a setting
Paul

Le 17 déc. 07 à 18:43, Greg Couch a écrit :

On Fri, 14 Dec 2007, Abbas wrote:

Hi,
One feature I really appreciated about chimera was the ability to
make pictures without a background, however recently i realized this
is not possible anymore I checked out under the effects dialog under
tools>viewing controls and it give me an error saying this wasn't
supported. I haven't changed my computer since i first started using
chimera I have updated to the latest version of chimera available for
OSX 10.4, I wonder if this is the cause of the problem.
I would really like to have pictures without backgrounds like I used
to, I know PyMol lets you do it, but I dislike this program. In any
case I would greatly appreciate any help/pointers on this issue.
Thanks in advance. abbas.

Transparent backgrounds depend on the graphics card capabilities  
reported
by OpenGL.  On Mac OS X, Apple decided not to support background
transparency (nor full window antialiasing) for OpenGL/X11  
applications,
so to use that feature you would have to use the Aqua version of  
chimera.
Unfortunately, the chimera's cross-platform user interface toolkit,  
Tk,
while improving for Aqua, has gotton worse for chimera, so you'll  
have to
use an old version of chimera for Aqua to get transparent backgrounds.
You can also file a bug report with Apple to help them decide to spend
the time to fix it (OpenGL "destination alpha" and multisampling not
supported in X11).

  Greg Couch
  UCSF Computer Graphics Lab
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