Hi Murpholino, It sounds like you answered your own question, since you say the map opened. What is the problem? Does it look weird? For us to say anything, you would need to be more specific about what you are trying to do, or what behaviors you are trying to get. Chimera and Coot are two different programs, so the way they behave is different, and one may have features the other does not. Since you said “opens nicely over the protein” in Coot, maybe you need to use Chimera command “vop cover” <http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/midas/vop.html#cover> Best, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco

On Feb 27, 2019, at 11:15 PM, Murpholino Peligro <murpholinox@gmail.com> wrote:

Here is what RIDL is https://github.com/GarmanGroup/RIDL I can open the map in coot specifying is a difference map and it opens nicely over the protein.

In chimera I can open the map but .....all my clicks won't reproduce the coot behavior :P ...

Thanks