How to lower the map size
Hi, Now I have a density map with a dimension of 820*820*820, it is too large for me to perform image processes with Chimera. So I was wondering whether there is a way to decrease the map size rather than re-reconstruct the map with bined particle image. please help me out! Thank you in advance! Zhihai Li
Hi Zhihai, If you set the “step” value to 2 (above the histogram in the volume viewer dialog) then Chimera uses every other grid point along the 3 axes (8 times less data). If you really want to produce a binned map (e.g. averaging 2x2x2 grid points to make a map half the size in each dimension), then use the Volume Filter dialog (menu Tools / Volume Data / Volume Filter) or the “vop bin” command, then save the resulting map to a new file (Volume Viewer dialog menu File / Save Map As…). Tom
On Mar 9, 2015, at 6:45 AM, 李智海 <21620101152414@stu.xmu.edu.cn> wrote:
Hi,
Now I have a density map with a dimension of 820*820*820, it is too large for me to perform image processes with Chimera. So I was wondering whether there is a way to decrease the map size rather than re-reconstruct the map with bined particle image.
please help me out! Thank you in advance!
Zhihai Li
_______________________________________________ Chimera-users mailing list Chimera-users@cgl.ucsf.edu http://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users
participants (2)
-
Tom Goddard -
李智海