Hi, When using AutoDock vina, I keep getting the message 'AttributeError: member babel_type not found'. I have uninstalled and reinstalled to try and fix it with no luck. Any suggestions on how to fix this? Thanks, Ryan Ryan Cairns PhD student School of Chemistry University of Nottingham pcxrc5@nottingham.ac.uk O'Reilly Research Group http://www.oreillyresearchgroup.com/ This message and any attachment are intended solely for the addressee and may contain confidential information. If you have received this message in error, please contact the sender and delete the email and attachment. Any views or opinions expressed by the author of this email do not necessarily reflect the views of the University of Nottingham. Email communications with the University of Nottingham may be monitored where permitted by law.
Hi Ryan, We are not the Autodock Vina developers. You may want to look at their website or ask on their mailing list… <http://vina.scripps.edu/> <http://vina.scripps.edu/questions.html> Maybe you mean you are using the “autodock vina" tool in Chimera, which connects to an outside web service running the Autodock Vina program. Still, it is unclear to me whether the message has anything to do with Chimera, since as far as I know it doesn’t do anything with babel types. It sounds like some atom type is unrecognized, but that’s just a guess. I hope this helps, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco
On Jan 25, 2019, at 4:20 AM, Ryan Cairns <Ryan.Cairns@nottingham.ac.uk> wrote:
Hi,
When using AutoDock vina, I keep getting the message 'AttributeError: member babel_type not found'. I have uninstalled and reinstalled to try and fix it with no luck. Any suggestions on how to fix this?
Thanks,
Ryan
Ryan Cairns
Hi Ryan, If this error actually is occurring within Chimera, you should use the “Report Bug” button on the error dialog to report the bug, which will send it to our bug-tracking system and which will contain a lot of additional information useful in debugging. —Eric Eric Pettersen UCSF Computer Graphics Lab
On Jan 25, 2019, at 9:48 AM, Elaine Meng <meng@cgl.ucsf.edu> wrote:
Hi Ryan, We are not the Autodock Vina developers. You may want to look at their website or ask on their mailing list…
<http://vina.scripps.edu/> <http://vina.scripps.edu/questions.html>
Maybe you mean you are using the “autodock vina" tool in Chimera, which connects to an outside web service running the Autodock Vina program. Still, it is unclear to me whether the message has anything to do with Chimera, since as far as I know it doesn’t do anything with babel types. It sounds like some atom type is unrecognized, but that’s just a guess.
I hope this helps, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco
On Jan 25, 2019, at 4:20 AM, Ryan Cairns <Ryan.Cairns@nottingham.ac.uk> wrote:
Hi,
When using AutoDock vina, I keep getting the message 'AttributeError: member babel_type not found'. I have uninstalled and reinstalled to try and fix it with no luck. Any suggestions on how to fix this?
Thanks,
Ryan
Ryan Cairns
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participants (3)
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Elaine Meng -
Eric Pettersen -
Ryan Cairns