search a sequence in UCSF chimera
Dear chimera-users, Is there a way to search a short amino acid sequence (for example: DDDDK) in an openned protein structure in UCSF chimera? Thanks ahead, Xiao
Hi Xiao, Sure! Just use the Chimera menu, Select... Sequence... Details here: <https://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/findseq.html> I hope this helps, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco
On Jun 9, 2021, at 9:49 PM, Xiao Lei via Chimera-users <chimera-users@cgl.ucsf.edu> wrote:
Dear chimera-users, Is there a way to search a short amino acid sequence (for example: DDDDK) in an openned protein structure in UCSF chimera? Thanks ahead, Xiao
Hi, Elaine, This works great. Thank you so much for your help. Regards, Xiao On Thu, Jun 10, 2021 at 10:27 AM Elaine Meng <meng@cgl.ucsf.edu> wrote:
Hi Xiao, Sure! Just use the Chimera menu, Select... Sequence...
Details here: <https://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/findseq.html>
I hope this helps, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco
On Jun 9, 2021, at 9:49 PM, Xiao Lei via Chimera-users < chimera-users@cgl.ucsf.edu> wrote:
Dear chimera-users, Is there a way to search a short amino acid sequence (for example: DDDDK) in an openned protein structure in UCSF chimera? Thanks ahead, Xiao
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Elaine Meng -
Xiao Lei