Hi Damien, There seems to be very few tools that output PDBML, and Chimera unfortunately is no exception. :-( It doesn't even seem to be a format that OpenBabel can output. The only tool that my googling uncovered is 3DNA. It can apparently write PDBML, though I don't think it can handle non-nucleic acid structures [the documentation for 3DNA leaves a little to be desired so I could be wrong about that limitation]. I hope you get lucky and find something that writes it! --Eric Eric Pettersen UCSF Computer Graphics Lab http://www.cgl.ucsf.edu On Jun 23, 2011, at 11:34 PM, Damien LARIVIERE wrote:

Dear all,

WritePDB enables to save a displayed structure in the pdb format.

Is there a way to save the structure into the PDBML format?

If not, do you know a (simple) way to do that?

Many thanks

Damien

_______________________________________________ Chimera-users mailing list Chimera-users@cgl.ucsf.edu http://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users