regarding opening mouth or poc file on chimera
Hi Chimera team, I have a quick question regarding opening CASTp file on Chimera. I downloaded the pdb file together with mouth and poc file and saved them in the same folder. I also made sure the names are consistent among these files. However, I am still getting error messages as following. Error reading 3mbg.poc: ValueError: Mouth info header missing or IDs not consecutive File "/home/ming/.local/UCSF-Chimera64-1.11.2/share/CASTp/__init__.py", line 88, in processInfoFile " IDs not consecutive" % label.capitalize()) See reply log for Python traceback. I looked up the Chimera manual online and it looks pretty straight forward to open either the mouth or poc file but I am not sure why I keep getting the error messages. Any help will be appreciated. Thanks, Ming
Hi Ming, Does the start of your .mouthInfo file look similar to this: i.e. there is a header line, and then the IDs in the following lines start at 1 and increase by 1 each line? If they do, maybe you should send me the files (directly) and I could give you a better diagnosis of the problem… —Eric Eric Pettersen UCSF Computer Graphics Lab
On Jan 5, 2018, at 1:01 PM, Ming <dongming618@gmail.com> wrote:
Hi Chimera team,
I have a quick question regarding opening CASTp file on Chimera. I downloaded the pdb file together with mouth and poc file and saved them in the same folder. I also made sure the names are consistent among these files. However, I am still getting error messages as following.
Error reading 3mbg.poc: ValueError: Mouth info header missing or IDs not consecutive
File "/home/ming/.local/UCSF-Chimera64-1.11.2/share/CASTp/__init__.py", line 88, in processInfoFile " IDs not consecutive" % label.capitalize())
See reply log for Python traceback.
I looked up the Chimera manual online and it looks pretty straight forward to open either the mouth or poc file but I am not sure why I keep getting the error messages.
Any help will be appreciated.
Thanks,
Ming _______________________________________________ Chimera-users mailing list: Chimera-users@cgl.ucsf.edu Manage subscription: http://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users
participants (2)
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Eric Pettersen
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Ming