2d projection of 3d model
Dear colleagues, I would like to make 2d projection of my 3d model and save it as an image. How can I do that? Thank you! Sincerely, Dmitry
Hi Dmitry, The e2project3d.py from eman2 should works. Good luck, Zongli ________________________________ From: Chimera-users <chimera-users-bounces@cgl.ucsf.edu> on behalf of D.A. Semchonok <semchonok@gmail.com> Sent: Wednesday, October 18, 2017 10:10:23 AM To: Chimera_mailing_list Subject: [Chimera-users] 2d projection of 3d model Dear colleagues, I would like to make 2d projection of my 3d model and save it as an image. How can I do that? Thank you! Sincerely, Dmitry
Hi Dmitry, You could do this in Chimera using volume style display, making it 100% transparent, and using orthographic projection (instead of the default perspective projection), e.g. using Chimera commands. vol #0 transp 1.0 bright 1 set projection orthographic You’d also have to choose the brightness for each map value by adjusting the yellow brightness curve on the histogram in the Volume Viewer dialog. If you really want to get something for quantitative comparison to class averages you should use other software intended for that purpose. Tom
On Oct 18, 2017, at 7:10 AM, D.A. Semchonok <semchonok@gmail.com> wrote:
Dear colleagues,
I would like to make 2d projection of my 3d model and save it as an image.
How can I do that?
Thank you!
Sincerely, Dmitry _______________________________________________ Chimera-users mailing list: Chimera-users@cgl.ucsf.edu <mailto:Chimera-users@cgl.ucsf.edu> Manage subscription: http://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users <http://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users>
participants (3)
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D.A. Semchonok -
Li, Zongli -
Tom Goddard