Reading electrostatic potential map in cube format into Chimera
Hi, Does Chimera accept electrostatic potential in cube format (apparently that's what the new Delphi version 8.4 produces). I noticed a cube input under gaussian cube grid, is that the one I should use? Apparently the source of my recent problem with reading an electrostatic potential map had to do with this change of format. I'd appreciate your input.
Thanks, Boaz
Boaz Shaanan, Ph.D. Dept. of Life Sciences Ben-Gurion University of the Negev Beer-Sheva 84105 Israel
E-mail: bshaanan@bgu.ac.il Phone: 972-8-647-2220 Fax: 972-8-647-2992 or 972-8-646-1710
Hi Boaz, That may be a different “cube" format, but I don’t know for sure. Is this the same file that you couldn’t open before? Then I’d say no, especially if you already tried opening it as gaussian cube grid :-D … but if you have any example files to share, or a link where this format output from DelPhi 8.4 is documented, that would be helpful. Given programmer time is very limited, I can’t say if it will be supported, however. Thanks, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco
On Apr 30, 2019, at 3:11 PM, Boaz Shaanan bshaanan@bgu.ac.il wrote:
Hi, Does Chimera accept electrostatic potential in cube format (apparently that's what the new Delphi version 8.4 produces). I noticed a cube input under gaussian cube grid, is that the one I should use? Apparently the source of my recent problem with reading an electrostatic potential map had to do with this change of format. I'd appreciate your input. Thanks, Boaz
participants (2)
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Boaz Shaanan -
Elaine Meng