
Hi I am trying to get a voxel encodings (coordinates) of molecules that are run through Chimera, as a deep learning model will have an easier time with such data. I am unsure how to retrieve such data from chimera. Any help would be greatly appreciated Andrew

Write the coordinates to PDB format, the coordinates there are atom centres on orthogonal axes in angstrom units. Translate and subdivide as required. B.
On 2019-06-07, at 10:46, Andrew Garven <garvena@mcmaster.ca> wrote:
Hi
I am trying to get a voxel encodings (coordinates) of molecules that are run through Chimera, as a deep learning model will have an easier time with such data. I am unsure how to retrieve such data from chimera.
Any help would be greatly appreciated
Andrew _______________________________________________ Chimera-users mailing list: Chimera-users@cgl.ucsf.edu Manage subscription: http://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users
participants (2)
-
Andrew Garven
-
Boris Steipe