For this one, I found a solution:
Also is there a commandline version to access the conformations and to re-run kdssp on each interpolated conformation? I read you need the perframe command for that. Does anyone have a working example ?
There is a good example (and several more) in http://www.cgl.ucsf.edu/chimera/animations/animations.html (for instance leucyl-tRNA.cmd ) However, I still don't know how to re-open a morphing menu that disappeared and the per-frame kdssp is not yet clear to me yet. Thanks, Lothar
Hi Lothar, DId you see my previous reply? I explained when you can and can’t get the dialog back, and actually included a script with the per-frame ksdssp as an example. If you missed it, can be viewed here including example script contents: <http://plato.cgl.ucsf.edu/pipermail/chimera-users/2017-May/013476.html> Best, Elaine
On May 18, 2017, at 2:42 PM, esserlo@helix.nih.gov wrote:
For this one, I found a solution:
Also is there a commandline version to access the conformations and to re-run kdssp on each interpolated conformation? I read you need the perframe command for that. Does anyone have a working example ?
There is a good example (and several more) in http://www.cgl.ucsf.edu/chimera/animations/animations.html
(for instance leucyl-tRNA.cmd )
However, I still don't know how to re-open a morphing menu that disappeared and the per-frame kdssp is not yet clear to me yet.
Thanks, Lothar
Hi Lothar, DId you see my previous reply?
No. There was absolute silence from chimera-users till this one.
I explained when you can and canât get the dialog back, and actually included a script with the per-frame ksdssp as an example. If you missed it, can be viewed here including example script contents:
<http://plato.cgl.ucsf.edu/pipermail/chimera-users/2017-May/013476.html>
Okay I will look at this one. Thanks. I have been making some progress on my own in the meantime. L.
Best, Elaine
On May 18, 2017, at 2:42 PM, esserlo@helix.nih.gov wrote:
For this one, I found a solution:
Also is there a commandline version to access the conformations and to re-run kdssp on each interpolated conformation? I read you need the perframe command for that. Does anyone have a working example ?
There is a good example (and several more) in http://www.cgl.ucsf.edu/chimera/animations/animations.html
(for instance leucyl-tRNA.cmd )
However, I still don't know how to re-open a morphing menu that disappeared and the per-frame kdssp is not yet clear to me yet.
Thanks, Lothar
participants (2)
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Elaine Meng -
esserlo＠helix.nih.gov