Sir I want to know that if i had modeled a protein structure and want to categorize it into different chain or domain then how would i do this through chimera? Plz give the solution of question -- Rashmi Research scholar IMS, BHU
Hi Rashmi, You can change the chain ID and/or renumber residues: Chimera menu: Tools... Structure Editing... Change Chain IDs (or command "changechains"), Tools... Structure Editing... Renumber Residues (or command "resrenumber"). <http://www.cgl.ucsf.edu/chimera/docs/ContributedSoftware/editing/changechain...> <http://www.cgl.ucsf.edu/chimera/docs/ContributedSoftware/editing/renumber.ht...> You can search the documentation for terms like "change chain" or "chain ID" using the Chimera menu: Help... Search Documentation. Elaine ----- Elaine C. Meng, Ph.D. UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab Department of Pharmaceutical Chemistry University of California, San Francisco On Feb 5, 2013, at 10:48 PM, rashmi gupta wrote:
Sir I want to know that if i had modeled a protein structure and want to categorize it into different chain or domain then how would i do this through chimera?
Plz give the solution of question
Hi Rashmi, To name domains you can use the "namesel" (name selection) command, for example, select #0:1-10.A namesel domain1 color pink domain1 http://www.cgl.ucsf.edu/chimera/docs/UsersGuide/midas/namesel.html Tom On Feb 6, 2013, at 10:03 AM, Elaine Meng wrote:
Hi Rashmi, You can change the chain ID and/or renumber residues: Chimera menu: Tools... Structure Editing... Change Chain IDs (or command "changechains"), Tools... Structure Editing... Renumber Residues (or command "resrenumber").
<http://www.cgl.ucsf.edu/chimera/docs/ContributedSoftware/editing/changechain...> <http://www.cgl.ucsf.edu/chimera/docs/ContributedSoftware/editing/renumber.ht...>
You can search the documentation for terms like "change chain" or "chain ID" using the Chimera menu: Help... Search Documentation. Elaine ----- Elaine C. Meng, Ph.D. UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab Department of Pharmaceutical Chemistry University of California, San Francisco
On Feb 5, 2013, at 10:48 PM, rashmi gupta wrote:
Sir I want to know that if i had modeled a protein structure and want to categorize it into different chain or domain then how would i do this through chimera?
Plz give the solution of question
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participants (3)
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Elaine Meng -
rashmi gupta -
Tom Goddard