color zone on command line
Hi Chimera dev,
Following on from this post back from 2009:
http://plato.cgl.ucsf.edu/pipermail/chimera-users/2009-January/003514.html http://plato.cgl.ucsf.edu/pipermail/chimera-users/2009-January/003514.html
How would one also split map in this python script?
Thanks! Kyle
Hi Kyle, Now there are Chimera commands to color zone and split by zone, so you could use them directly or via the python approach to run Chimera commands. http://www.rbvi.ucsf.edu/chimera/docs/ProgrammersGuide/basicPrimer.html
For color zone, see “scolor zone” http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/midas/scolor.html
Splitting a map by the resulting color zones is a little harder to find because it’s not a regular command but a keyboard shortcut “sm” … however, it can be run with the regular command “ac sm” http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/midas/ac.html http://www.rbvi.ucsf.edu/chimera/docs/ContributedSoftware/accelerators/alist...
I hope this helps, Elaine ----- Elaine C. Meng, Ph.D. UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab Department of Pharmaceutical Chemistry University of California, San Francisco
On Dec 22, 2016, at 1:57 PM, Kyle Morris kylelmorris@berkeley.edu wrote:
Hi Chimera dev, Following on from this post back from 2009:
http://plato.cgl.ucsf.edu/pipermail/chimera-users/2009-January/003514.html
How would one also split map in this python script? Thanks! Kyle
participants (2)
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Elaine Meng
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Kyle Morris