Hi Yasan, The problem reproducing the clip plane positions is because the "clip list" command was reporting the position of the far clip plane with the wrong sign. I have fixed this bug (in tonight's daily build). Tom
On Jun 29, 2019, at 3:42 PM, Yazan Abbas <yazan.abbas@gmail.com> wrote:
Hi,
Instead of using chimera sessions (which can get very big) to save my work when preparing figures for publications, I save all my commands in a .cxc file to be read by chimeraX later. Is there a single command that outputs all the necessary information in an appropriate format needed to restore a view?
Currently what I have done is alias myview view matrix; zoom to output the information into the log, but the output needs to be re-formatted whenever I want to use that information with the view matrix and zoom commands. Is there a command that outputs that information in a format ready for copying and pasting?
I know name view can partially fulfil what I am looking for, but it is only session specific.
On a related note, I want to also restore the clipping for each figure/panel I create, but I don't seem to be using the clip command appropriately. For example, if I enter the command clip list, and the output is Using 2 clip planes: far -34.697, near -45.723, executing the command clip far -34.697 near -45.723 does not restore the same view. Am I missing something?
Thanks,
Yazan _______________________________________________ ChimeraX-users mailing list ChimeraX-users@cgl.ucsf.edu Manage subscription: http://www.rbvi.ucsf.edu/mailman/listinfo/chimerax-users