Hi there,

Hope you’re well.

I’m sure this is a rookie question, but I’m having trouble displaying the methyl groups on a methylated DNA sequence, as shown in PDB 6C1Y.

I’ve tried selecting the DNA and then showing the methyl functional group, but this selects all the methyl groups including those in the protein sequence. I also tried selecting the individual bases I know are methylated using eg select #2/C:6, but not sure of the command to show the methyl group following this ie select #2/C:6 show methyl does not work, whereas show methyl as a solo command shows all methyl groups in the whole structure. Couldn’t find anything in the help files, unfortunately.

Thanks so much and best wishes,

Maja