Hi Jonathan, Sounds like there might be a bug here but you left out so many details there is no way to tell. How are you segmenting the density? You would have to explain all the steps. Tom
On Aug 18, 2022, at 2:18 PM, Myers, Jonathan via ChimeraX-users <chimerax-users@cgl.ucsf.edu> wrote:
Dear ChimeraX User Group,
I'm trying to segment a map using an atomic model as a reference. To make my life easier for many of the operations I use in my work, I centered all of my structures to the origin of the session. However, when I want to segment out parts of my density, the original coordinates of the map are used for the various regions. I, therefore, can't use my centered structures as a reference as I had originally planned. I don't know if this is a bug or if this is intentionally programmed, but I am having a difficult time re-aligning the segmentation to my origin-based coordinate system.
Is there a better way to do what I am trying to do or am I out of luck? Thank you.
Shosholoza,
Jonathan Myers _______________________________________________ ChimeraX-users mailing list ChimeraX-users@cgl.ucsf.edu <mailto:ChimeraX-users@cgl.ucsf.edu> Manage subscription: https://www.rbvi.ucsf.edu/mailman/listinfo/chimerax-users <https://www.rbvi.ucsf.edu/mailman/listinfo/chimerax-users>