Hi Ruby, You can use either the ChimeraX menu: File... Save (choose Files of type: PDB in the dialog, browse to the the intended save location, etc.) or the "save" command: <https://rbvi.ucsf.edu/chimerax/docs/user/commands/save.html#pdb> To see the User Guide, use menu: Help... User Guide. Regards, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco
On Sep 15, 2021, at 5:18 AM, Ruby Pelingon via ChimeraX-users <chimerax-users@cgl.ucsf.edu> wrote:
Hi, I tried using chimeraX and alphafold to predict my fusion protein. The result seems promising and generated a .pdb file. I would like to enquire how to save the .pdb file. I would like to open the .pdb file using pymol. Thank you. Kind Regards, Ruby Pelingon