Dear Gagandeep, Maybe you are referring to the RINalyzer Cytoscape app that works with the Chimera structureViz2 app for visualization. <https://apps.cytoscape.org/apps/rinalyzer> Unfortunately, I don't know of a Cytoscape RIN app that works directly with ChimeraX. Of course, you can (independently from RING) display interactions such as contacts and H-bonds in either Chimera or ChimeraX, but as far as I know, you would have to use the built-in calculation methods instead of getting results from RING, or manually one by one show the each of the interactions that RING found. Regards, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Resource for Biocomputing, Visualization, and Informatics Department of Pharmaceutical Chemistry University of California, San Francisco
On Aug 20, 2025, at 5:22 AM, Gagandeep Singh via ChimeraX-users <chimerax-users@cgl.ucsf.edu> wrote:
Dear team , I have generated residue interaction network (RIN) data using RING 4.0 and would like to visualize this . I am familiar with UCSF Chimera, which supports visualization of RIN data, and I was wondering if ChimeraX also offers similar functionality. Kind regards -- गगनदीप सिंह / Gagandeep Singh डॉक्टरेट का विद्यार्थी / Doctoral student ब्रिक - ट्रासलेशनल स्वास्थ्य विज्ञान और प्रौद्योगिकी संस्थान BRIC- Translational Health Science and Technology Institute (भारत सरकार के जैव-प्रौद्योगिकी विभाग का एक स्वायत्त संस्थान) (An autonomous institute of the Dept of Biotechnology, Govt Of India) NCR Biotech Science Cluster, 3rd Milestone, Faridabad–Gurugram Expressway, PO box #04, Faridabad- 121001 (Haryana) _______________________________________________ ChimeraX-users mailing list -- chimerax-users@cgl.ucsf.edu To unsubscribe send an email to chimerax-users-leave@cgl.ucsf.edu Archives: https://mail.cgl.ucsf.edu/mailman/archives/list/chimerax-users@cgl.ucsf.edu/