[chimerax-users] Re: sybyl vs amber atom types in ChimeraX

On Fri, Mar 14, 2025, laurene.jacquot via ChimeraX-users wrote:

I am a master student currently working on a project where I need to generate a mol2 file with amber atom types for a protein.

I don't have a ChimeraX answer here, but rather a question: why do you need a protein mol2 file with Amber atom types? Amber workflows would not create a mol2 file for an entire protein; but of course, you may need such a file for some other purpose. If so, we may be able to find some Amber tools that does this (or avoids needing it), if the ChimeraX folks themselves don't have a solution. ....dave case