I am using fitmap command of chimerax to fit pdb to map, the command as below:

fitmap #2,3 inMap #1 seq 2 res 3.7

#2 and #3 are copy of each other and I manually placed them in different positions in map,

#2 and #3 come to same position after the command running, I had shift option false, but come to same result.

I remember it works in chimera.

Could you please point me out?

Thanks and have a nice day,

Yanhe