Hi Meng, Thank you! Both suggestions work for me. Kind regards, Priyanka On Tue, Sep 6, 2022 at 2:05 PM Elaine Meng <meng@cgl.ucsf.edu> wrote:
Hi Priyanka, I'm guessing you mean to color only atoms and not the ribbon, in which case you would just add "target a" or "atoms" (meaning atoms only) to the coloring command, e.g. show and color atoms of residues 10-20:
show :10-20 color :10-20 red target a
See explanation of "target" option: <https://rbvi.ucsf.edu/chimerax/docs/user/commands/color.html#simple>
However, if you are showing the actual backbone atoms (not ribbon) and you really only want to color the sidechains, you can also do that by specifying sidechain (e.g. "sideonly" if you don't want to include CA):
hide ribbons color :10-20 & sideonly yellow
Terms like "sideonly" that can be used in specification are explained here: <https://rbvi.ucsf.edu/chimerax/docs/user/commands/atomspec.html#builtin>
I hope this helps, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco
On Sep 6, 2022, at 10:55 AM, Priyanka Abeyrathne via ChimeraX-users < chimerax-users@cgl.ucsf.edu> wrote:
Hi, Could you let me know the command to color only the side chain not the backbone of amino acids in ChimeraX, please? Thank you. Kind regards, Priyanka