Hi Enrico, I'd expect your command to rotate about the center of your dimer. But apparently "center #1,2" is not the center of the dimer. Why? I'd guess it is not actually an exact homodimer. You can place a marker (fake atom) at where this center is using marker #3 position #1,2 and then you can try to figure out why that is not the center of the dimer. https://www.cgl.ucsf.edu/chimerax/docs/user/commands/marker.html Tom
On May 31, 2024, at 9:13 AM, Enrico Martinez via ChimeraX-users <chimerax-users@cgl.ucsf.edu> wrote:
Dear Chimera-X users!
I am dealing with the visualisation of a complex dimer where each monomer is defined as a separate model like #1 and #2. For visualisation purposes I need to rotate the input construct by 180 degrees with the axis of rotation in the middle between the two monomers to avoid the shift of the complex in the x-plane at the end. That's what I have tried:
# turn on 180 deg during 10 sec roll y 0.72 250 center #1,2 protein wait 250
but the construct still shifted a bit towards one of the monomers. How could I do ii using the rotation axis, which would be in the center between them ?
Many thanks in advance
Enrico _______________________________________________ ChimeraX-users mailing list -- chimerax-users@cgl.ucsf.edu To unsubscribe send an email to chimerax-users-leave@cgl.ucsf.edu Archives: https://mail.cgl.ucsf.edu/mailman/archives/list/chimerax-users@cgl.ucsf.edu/