Hi Reza, if you mean Chai the machine learning model/alphafold clone then you'd have to do a bit of work in connecting their output with Chimerax.
.npy files are generally the format in which python's `numpy` package saves multidimensional arrays to disk. I'm not sure what their json output is.
Your best bet is probably finding how the data in your files relates to chimerax' api and writing a script to connect the two.

On Sat, Jan 25, 2025 at 4:36 PM Reza Salavati, Prof. via ChimeraX-users <chimerax-users@cgl.ucsf.edu> wrote:

Hello,

 

I have downloaded the Chai discovery data in .npy and .json file formats.

 

How can I open these files in Chimera X?

 

Thank you

 

Reza

 

 

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