Hi, I want to do select zone and hbonds commands for about 10 objects. Is there a way to do each with a single command, similar to using mm to align multiple objects to the same target?

are there do loops or foreachobject commands?

hbonds #1/V restrict #1/A-B color black
hbonds #2/V restrict #2/A-B color black

select zone #1/V 3.6 #1/A,B residues true; name frozen inter_vcam_a4b1a sel

show sel atoms
select zone #1/A,B 3.6 #1/V residues true; name frozen inter_vcam_a4b1b sel
show sel atoms

for zones, can one get contacts on both sides in a single command?

- Tim

Timothy A. Springer, Ph.D.

Latham Family Professor, Harvard Medical School and Boston Children's Hospital

Founder, Institute for Protein Innovation