Hi Cameron, Most of the commands work using the ChimeraX atomspec [0], which lets you create selections of parts of a structure. If for example you are using matchmaker and want to align residues 50-100 of model #1 to model #2 you can do: ‘mm #1:50-100 to #2’ Hope that helps, Tom [0] https://www.cgl.ucsf.edu/chimerax/docs/user/commands/atomspec.html
On 10. May 2022, at 06:07, Cameron Larson via ChimeraX-users <chimerax-users@cgl.ucsf.edu> wrote:
Hello,
I would like to know how to align structures at specific residues. For example, how do I align an ion channel at the selectivity filter instead of aligning the entire structure?
Does this ability exist with chimeraX?
-Thanks
CL _______________________________________________ ChimeraX-users mailing list ChimeraX-users@cgl.ucsf.edu Manage subscription: https://www.rbvi.ucsf.edu/mailman/listinfo/chimerax-users