From: ChimeraX-users <chimerax-users-bounces@cgl.ucsf.edu> on behalf of Oliver Clarke <olibclarke@gmail.com>
Sent: Wednesday, May 19, 2021 9:58 AM
To: Ioannis Skalidis
Cc: chimerax-users@cgl.ucsf.edu
Subject: [EXTERNAL] Re: [chimerax-users] Colour residues by local resolution estimation map

Hi Yiannis,

I am not sure whether this is possible in ChimeraX yet, but you can do this in Chimera using a combination of `Values at Atom Positions` and `Render by Attribute`.

https://www.cgl.ucsf.edu/chimera/docs/ContributedSoftware/density/density.html

https://www.cgl.ucsf.edu/chimera/docs/ContributedSoftware/render/render.html

Cheers

Oli

On May 19, 2021, at 9:22 AM, Ioannis Skalidis <johnskalidis@gmail.com> wrote:

Dear all,

I am trying to color a protein model based on the local resolution of the corresponding map. I can color the overall surface of the model, but not the residues themselves. Is there a way to do this, e.g, color the model backbone somehow?

Thanks a lot for your help!

Cheers,
Yiannis

--

Skalidis Ioannis, MSc
Biochemistry & Cryo-EM Scientist
PhD Candidate
Kastritis Laboratory for Biomolecular Research
Cryo-Electron Microscopy & Computational Structural Biology

________________________________________________
Martin-Luther-Universität Halle-Wittenberg
Biozentrum, Room A.2.21
IWE ZIK HALOmem NWG III
"Kryo-Elektronenmikroskopie an Membranproteinkomplexen"
Weinbergweg 22, 06120 Halle
tel: +49 345 5524986
web (Lab): https://blogs.urz.uni-halle.de/kastritislab/
web (HALOmem): https://www.halomem.de/en/

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