Hi Andy, There is no "group" keyword in the ChimeraX "sym" command, see the help: <https://rbvi.ucsf.edu/chimerax/docs/user/commands/sym.html#symmetry> (you can see your own copy of that page by clicking the "sym" link in the Log or by entering command "help sym") For the command to be understood, you need to remove the word "group" .... i.e. sym #1 c6*h,39.1,19.3,7,-1 coord #2 I hope this helps, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco
On Jun 9, 2023, at 11:57 AM, postmaster--- via ChimeraX-users <chimerax-users@cgl.ucsf.edu> wrote:
From: "Sen, Anindito" <andysen@tamu.edu> Subject: sym command Date: June 9, 2023 at 11:55:38 AM PDT To: ChimeraX-users <chimerax-users-bounces@cgl.ucsf.edu>
Dear All,
I am trying to generate symmetric copies of the atomic structure in a filament map and I get the following error
sym #1 group c6*h,39.1,19.3,7,-1 coord #2 (atomic structure is #1 and the map is #2)
error - Expected a keyword
What is incorrect in the command.
Stay safe & Regards
Anindito Sen. Ph.D
Microscopy and Imaging Center Texas A&M University 301 Old Main Dr College Station, TX 77843-2257
Office: ILSB Room 1133 Tel. 979-458-9881 fax: 979-847-8933 http://microscopy.tamu.edu