In that case, you can do that (delete the sidechains) to get your desired coloring behavior! You can have an additional copy open for when you need the sidechain atoms for display or other analyses. Elaine
On Nov 8, 2024, at 7:50 AM, julian--- via ChimeraX-users <chimerax-users@cgl.ucsf.edu> wrote:
AF3 does populate bfactor for each atom. So at least for proteins, doing:
delete sideonly color bfactor palette 0,#ef821e:49.99,#ef821e:50,#f6ed12:69.99,#f6ed12:70,#10cff1:89.99,#10cff1:90,#106dff:100,#106dff
reproduces a cartoon that's displayed on the AF3 server exactly as far as I can see _______________________________________________ ChimeraX-users mailing list -- chimerax-users@cgl.ucsf.edu To unsubscribe send an email to chimerax-users-leave@cgl.ucsf.edu Archives: https://mail.cgl.ucsf.edu/mailman/archives/list/chimerax-users@cgl.ucsf.edu/