On 8 Oct 2024, at 19:52, Tom Goddard <goddard@sonic.net> wrote:

Hi Guillaume,

  Seems like replacing the existing assemblies would be useful.  I've enhanced the add_mmcif_assembly option of the sym command to accept the value "replace" that does that.  For example

sym #1 C2 add replace

It will be in tonight''s ChimeraX builds dated Oct 8, 2024 or later.  Thanks for the suggestion.

  Tom

On Oct 8, 2024, at 1:06 AM, Guillaume Gaullier via ChimeraX-users <chimerax-users@cgl.ucsf.edu> wrote:

Hello,

I am using the asymmetric unit of a PDB entry to define my own biological assembly based on a symmetric cryoEM map. Using the sym command, I can store the new biological assembly in the cif file. However, it seems I can't remove the biological assembly that came with the PDB entry's annotation, but that is now completely irrelevant because I moved the coordinates into my map (when I apply it, I get new chains completely outside the map). Is there a way to do this without needing to edit the cif file with a text editor?

Thank you,

Guillaume

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