Hi,

 

Foldseek ran successfully with PDB but crashed in an independent comparison to AlphaFold DB (see attached).

Looks like a problem with alphafold file name?

 

Thanks for your help.

 

Best,

david

 

 

 

 

David M. Miller, III, PhD

Professor

Cell and Developmental Biology

465 21st Avenue South

PMB 407935

3120 MRB III
Vanderbilt University
Nashville, TN   37240-7935

(615) 343-3447

https://medschool.vanderbilt.edu/miller-lab/