Hi Stel, Here is an example using Python to interactively inspect atomic model data in ChimeraX https://rbvi.github.io/chimerax-recipes/inspect/inspect.html <https://rbvi.github.io/chimerax-recipes/inspect/inspect.html> And there are other examples using Python with ChimeraX on the ChimeraX Recipes web page https://rbvi.github.io/chimerax-recipes/ <https://rbvi.github.io/chimerax-recipes/> and information about the Python atomic data structures in the ChimeraX Programming Guide https://www.cgl.ucsf.edu/chimerax/docs/devel/modules.html <https://www.cgl.ucsf.edu/chimerax/docs/devel/modules.html> Tom
On Nov 23, 2022, at 2:55 AM, Stylianos Iliadis via ChimeraX-users <chimerax-users@cgl.ucsf.edu> wrote:
Hello,
I would like to develop a small bundle-plugin for automatically annotating residue labels in protein structures. I tried to access ChimeraX via command line when ChimeraX was running (GUI open) with an opened protein structure in order to study the structure objects hierarchy( chain ->residue ->atoms). This would help me understand it better and code accordingly. Unfortunately, I didn’t manage to do so.
Could you please suggest me a way, a page or terminal where I could read more about the internal structure of ChimeraX and if possible to programmatically access a session when it’s running in ChimeraX.
Kind regards, Stel Iliadis _______________________________________________ ChimeraX-users mailing list ChimeraX-users@cgl.ucsf.edu <mailto:ChimeraX-users@cgl.ucsf.edu> Manage subscription: https://www.rbvi.ucsf.edu/mailman/listinfo/chimerax-users <https://www.rbvi.ucsf.edu/mailman/listinfo/chimerax-users>