This is great!Thanks,I’ll try tomorrow and give u some feedback.P--Il giorno mer 6 mar 2019 alle 21:33 Tom Goddard <goddard@sonic.net> ha scritto:Hi Pascal,I added the ability to save pseudobond files (.pb suffix) in ChimeraX, will be in tonight's builds,select /A,B min 15 max 24save somelinks.pb selectedOnly trueThis saves crosslinks between chains A and B with lengths between 15 and 24. The link colors and radii are also saved.TomOn Mar 6, 2019, at 2:33 AM, Pascal Albanese wrote:Dear ChimearX Users and developers,I'm using ChimeraX for visualization and analysis of pseudobonds datasets from Crosslinking-MS and i found new features very useful (min max selection etc).I think it would be useful (but i don't know how much effort will be required) to be able to select subsets of distances (e.g. form 15 to 24 Angstroms, or involving chain A and B) and being able to create and export these subsets. for instance i have a Complex of A, B and C and i want to select all pseudo-bonds involving A and B and export them as pb file (to be able to load them as a separate model lateron). Or to sel min 15 max 24, and then export them as pb file (with "save" function).I think it would be really useful for both crosslinks visualization and analysis (i work with datasets of thousands of crosslinks on big complexes which make difficult to subselect them, i have to do it with pymol, then generate subsets and reformat them as .pb files).i had a look to previous threads, but i didn't found similar topics. If i'm wrong my apologize.Thank you!Pascal--Pascal Albanese, PhDPost-doc, Politecnico di TorinoDipartimento DISAT,BioSolar Lab@Environment Park
e-mail: pascal.albanese@polito.itPhone number: +39 011 2257655_______________________________________________
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http://www.rbvi.ucsf.edu/mailman/listinfo/chimerax-usersPascal Albanese, PhD
Post-doc, Politecnico di Torino
Dipartimento DISAT,
BioSolar Lab@Environment Park
Via Livorno 60
10144 Torino
e-mail: pascal.albanese@polito.it
Phone number: +39 011 2257655
Pascal Albanese, PhD
Post-doc, Politecnico di Torino
Dipartimento DISAT,
BioSolar Lab@Environment Park
Via Livorno 60
10144 Torino
e-mail: pascal.albanese@polito.it