The ChimeraX AlphaFold Error Plot tool works for me with an AlphaFold 3 dimer prediction. You'd have to explain in more detail what error you are getting. Also you may need to use a current ChimeraX version (1.8 or 1.9) if the dimer has more than proteins with standard residues. Older ChimeraX (1.7 and older) only handled AlphaFold 2 dimers with standard amino acids. Tom
On Jan 15, 2025, at 10:42 AM, Jean-François Bureau via ChimeraX-users <chimerax-users@cgl.ucsf.edu> wrote:
Hi, When I stimulate dimer using alphafold3, it is not possible to load the error plot since Chimerax is waiting to have the data of the first protein and find that of both. Best JF Bureau _______________________________________________ ChimeraX-users mailing list -- chimerax-users@cgl.ucsf.edu To unsubscribe send an email to chimerax-users-leave@cgl.ucsf.edu Archives: https://mail.cgl.ucsf.edu/mailman/archives/list/chimerax-users@cgl.ucsf.edu/